Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | EZ437_04560 | Not Available | Positive | 1040660 - 1041154 | 18811.6 |
| m20/m25/m40 family metallo-hydrolase | EZ437_04565 | Not Available | Negative | 1041151 - 1042104 | 34830.6 |
| duf4407 domain-containing protein | EZ437_04570 | Not Available | Negative | 1042101 - 1043201 | 41428.0 |
| rhodanese-like domain-containing protein | EZ437_04575 | Not Available | Positive | 1043347 - 1043664 | 11911.3 |
| hypothetical protein | EZ437_04580 | Not Available | Positive | 1043667 - 1043852 | 7208.24 |
| dipeptide epimerase | EZ437_04585 | Not Available | Negative | 1043842 - 1044876 | 38363.5 |
| hypothetical protein | EZ437_04590 | Not Available | Positive | 1044962 - 1045930 | 37297.7 |
| rhomboid family intramembrane serine protease | EZ437_04595 | Not Available | Negative | 1045927 - 1046544 | 22967.5 |
| hypothetical protein | EZ437_04600 | Not Available | Negative | 1046545 - 1048284 | 67087.0 |
| porin family protein | EZ437_04605 | Not Available | Negative | 1048298 - 1048957 | 24179.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

