Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EZ437_04050 | Not Available | Positive | 933217 - 934473 | 46195.3 |
| tetr/acrr family transcriptional regulator | EZ437_04055 | Not Available | Positive | 934511 - 935164 | 25001.9 |
| n-acetyltransferase | EZ437_04060 | Not Available | Positive | 935267 - 935845 | 22493.3 |
| luxr family transcriptional regulator | EZ437_04065 | Not Available | Positive | 935867 - 936820 | 37023.3 |
| cyclic nucleotide-binding domain-containing protein | EZ437_04070 | Not Available | Positive | 936845 - 937450 | 23292.9 |
| doxx family membrane protein | EZ437_04075 | Not Available | Positive | 937571 - 937999 | 16304.7 |
| hypothetical protein | EZ437_04080 | Not Available | Positive | 938078 - 938356 | 9846.55 |
| tlpa family protein disulfide reductase | EZ437_04085 | Not Available | Negative | 938410 - 939975 | 59520.6 |
| ragb/susd family nutrient uptake outer membrane protein | EZ437_04090 | Not Available | Negative | 940001 - 941368 | 51337.4 |
| susc/raga family tonb-linked outer membrane protein | EZ437_04095 | Not Available | Negative | 941373 - 944612 | 120574.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

