Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | EZ437_04000 | Not Available | Negative | 915462 - 918782 | 121268.0 |
| fecr family protein | EZ437_04005 | Not Available | Negative | 918926 - 920257 | 49381.4 |
| rna polymerase sigma-70 factor | EZ437_04010 | Not Available | Negative | 920236 - 920799 | 22225.4 |
| polyketide cyclase/dehydrase | EZ437_04015 | Not Available | Negative | 921308 - 921835 | 19724.1 |
| hypothetical protein | EZ437_04020 | Not Available | Negative | 921909 - 924476 | 94951.0 |
| arac family transcriptional regulator | EZ437_04025 | Not Available | Positive | 924786 - 925682 | 34313.2 |
| sugar phosphate isomerase/epimerase | EZ437_04030 | Not Available | Negative | 925643 - 926485 | 32707.8 |
| tonb-dependent receptor | EZ437_04035 | Not Available | Positive | 926977 - 930168 | 115504.0 |
| ragb/susd family nutrient uptake outer membrane protein | EZ437_04040 | Not Available | Positive | 930195 - 931661 | 53992.9 |
| phytanoyl-coa dioxygenase family protein | EZ437_04045 | Not Available | Positive | 932079 - 932897 | 30415.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

