Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | EZ437_00330 | Not Available | Positive | 75004 - 76413 | 50802.9 |
| beta-n-acetylhexosaminidase | EZ437_00335 | Not Available | Positive | 76505 - 78382 | 71146.2 |
| trna pseudouridine synthase a | EZ437_00340 | Not Available | Positive | 78395 - 79204 | 31128.6 |
| doxx family protein | EZ437_00345 | Not Available | Positive | 79290 - 79745 | 16612.2 |
| shikimate kinase | EZ437_00350 | Not Available | Negative | 79732 - 80235 | 18822.4 |
| abc transporter permease | EZ437_00355 | Not Available | Negative | 80240 - 81295 | 39179.6 |
| doxx family protein | EZ437_00360 | Not Available | Negative | 81298 - 82449 | 43423.2 |
| duf1599 domain-containing protein | EZ437_00365 | Not Available | Negative | 82458 - 83000 | 20447.8 |
| dihydropteroate synthase | EZ437_00370 | Not Available | Positive | 83092 - 83952 | 31113.8 |
| tigr00159 family protein | EZ437_00375 | Not Available | Positive | 83952 - 84743 | 29717.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

