Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | EZ437_03840 | Not Available | Positive | 885856 - 887526 | 61050.2 |
| hypothetical protein | EZ437_03845 | Not Available | Positive | 887539 - 888426 | 31876.9 |
| hypothetical protein | EZ437_03850 | Not Available | Positive | 888701 - 889171 | 17739.3 |
| ld-carboxypeptidase | EZ437_03860 | Not Available | Negative | 890148 - 891053 | 33151.9 |
| methionine--trna ligase | EZ437_03865 | Not Available | Positive | 891096 - 893204 | 79655.2 |
| duf3667 domain-containing protein | EZ437_03870 | Not Available | Negative | 893216 - 893938 | 27427.9 |
| antibiotic biosynthesis monooxygenase | EZ437_03875 | Not Available | Negative | 894029 - 894325 | 11643.9 |
| formamidopyrimidine-dna glycosylase | EZ437_03880 | Not Available | Negative | 894367 - 895146 | 29137.4 |
| nuclear transport factor 2 family protein | EZ437_03885 | Not Available | Negative | 895205 - 895567 | 13509.4 |
| hypothetical protein | EZ437_03890 | Not Available | Negative | 895591 - 895770 | 6408.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

