Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ437_03790 | Not Available | Positive | 870554 - 871306 | 28613.6 |
| duf3078 domain-containing protein | EZ437_03795 | Not Available | Positive | 871379 - 872410 | 39073.8 |
| signal recognition particle protein | EZ437_03800 | Not Available | Positive | 872508 - 873848 | 49008.8 |
| atp-binding protein | EZ437_03805 | Not Available | Positive | 873924 - 875462 | 55860.7 |
| dna polymerase iii subunit | EZ437_03810 | Not Available | Positive | 875495 - 876643 | 43604.6 |
| hypothetical protein | EZ437_03815 | Not Available | Positive | 876645 - 878063 | 52617.9 |
| gliding motility lipoprotein gldh | EZ437_03820 | Not Available | Positive | 878056 - 878532 | 17863.4 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | EZ437_03825 | Not Available | Negative | 878515 - 879822 | 47557.1 |
| zinc carboxypeptidase | EZ437_03830 | Not Available | Positive | 879911 - 882361 | 92106.9 |
| susc/raga family tonb-linked outer membrane protein | EZ437_03835 | Not Available | Positive | 882666 - 885836 | 114606.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

