Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate--trna ligase | EZ437_03180 | Not Available | Positive | 748295 - 750040 | 66146.4 |
| hypothetical protein | EZ437_03185 | Not Available | Negative | 750076 - 750525 | 16575.8 |
| phage holin family protein | EZ437_03190 | Not Available | Negative | 750503 - 750883 | 14579.8 |
| ytxh domain-containing protein | EZ437_03195 | Not Available | Negative | 750910 - 751176 | 9378.06 |
| ai-2e family transporter | EZ437_03200 | Not Available | Negative | 751231 - 752283 | 39153.2 |
| response regulator | EZ437_03205 | Not Available | Negative | 752295 - 753752 | 54401.1 |
| pas domain s-box protein | EZ437_03210 | Not Available | Negative | 753756 - 755324 | 60481.2 |
| sigma-54-dependent fis family transcriptional regulator | EZ437_03215 | Not Available | Negative | 755391 - 756791 | 52134.6 |
| enoyl-coa hydratase | EZ437_03220 | Not Available | Negative | 756946 - 757722 | 27553.5 |
| cobalamin b12-binding domain-containing protein | EZ437_03225 | Not Available | Negative | 757726 - 758145 | 15009.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

