Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | EZ437_02725 | Not Available | Positive | 648093 - 649214 | 41294.9 |
| susc/raga family tonb-linked outer membrane protein | EZ437_02730 | Not Available | Positive | 649426 - 652863 | 126227.0 |
| ragb/susd family nutrient uptake outer membrane protein | EZ437_02735 | Not Available | Positive | 652867 - 654312 | 53868.9 |
| ahpc/tsa family protein | EZ437_02740 | Not Available | Positive | 654448 - 655581 | 42297.7 |
| wyl domain-containing protein | EZ437_02745 | Not Available | Negative | 655582 - 656622 | 40118.4 |
| slipin family protein | EZ437_02750 | Not Available | Positive | 657458 - 658552 | 41488.7 |
| rtcb family protein | EZ437_02755 | Not Available | Positive | 658591 - 660012 | 51501.0 |
| rna-binding transcriptional accessory protein | EZ437_02760 | Not Available | Negative | 660114 - 662438 | 85548.1 |
| pyruvate dehydrogenase complex e1 component subunit beta | EZ437_02765 | Not Available | Negative | 662541 - 663527 | 35990.6 |
| pd-(d/e)xk nuclease family protein | EZ437_02770 | Not Available | Negative | 663704 - 666601 | 110445.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

