Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | EZ437_02525 | Not Available | Negative | 597209 - 600277 | 110701.0 |
| anhydro-n-acetylmuramic acid kinase | EZ437_02530 | Not Available | Negative | 600411 - 601610 | 42872.1 |
| glucosamine-6-phosphate deaminase | EZ437_02535 | Not Available | Positive | 602114 - 604033 | 72626.4 |
| duf5009 domain-containing protein | EZ437_02540 | Not Available | Positive | 604126 - 605199 | 39720.4 |
| insulinase family protein | EZ437_02545 | Not Available | Positive | 605226 - 608093 | 105998.0 |
| glycoside hydrolase | EZ437_02550 | Not Available | Negative | 608150 - 609700 | 59099.0 |
| hypothetical protein | EZ437_02555 | Not Available | Positive | 609883 - 610791 | 34578.1 |
| hamp domain-containing histidine kinase | EZ437_02560 | Not Available | Negative | 610783 - 614466 | 141555.0 |
| [acyl-carrier-protein] s-malonyltransferase | EZ437_02565 | Not Available | Negative | 614545 - 615426 | 31066.3 |
| gtp cyclohydrolase i fole | EZ437_02570 | Not Available | Negative | 615476 - 616105 | 23730.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

