Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconate 2-dehydrogenase subunit 3 family protein | EZ437_00185 | Not Available | Positive | 37202 - 37825 | 22658.2 |
| rhodanese-related sulfurtransferase | EZ437_00190 | Not Available | Positive | 37997 - 38938 | 35296.0 |
| atp-binding protein | EZ437_00195 | Not Available | Negative | 38935 - 40107 | 45112.7 |
| transcriptional regulator | EZ437_00200 | Not Available | Positive | 40253 - 43144 | 109629.0 |
| tonb-dependent receptor | EZ437_00205 | Not Available | Positive | 43391 - 46396 | 108170.0 |
| ragb/susd family nutrient uptake outer membrane protein | EZ437_00210 | Not Available | Positive | 46408 - 47898 | 54580.6 |
| lamg domain-containing protein | EZ437_00215 | Not Available | Positive | 47910 - 48767 | 30920.7 |
| beta-glucosidase | EZ437_00220 | Not Available | Positive | 48844 - 50520 | 62190.8 |
| duf3131 domain-containing protein | EZ437_00225 | Not Available | Positive | 50571 - 51926 | 51704.1 |
| xylosidase | EZ437_00230 | Not Available | Positive | 51930 - 53678 | 66941.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

