Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diacylglycerol kinase family lipid kinase | EZ437_02325 | Not Available | Negative | 547734 - 548606 | 31906.0 |
| methionine adenosyltransferase | EZ437_02330 | Not Available | Positive | 548838 - 550088 | 46013.5 |
| carbohydrate-binding protein | EZ437_02335 | Not Available | Negative | 550170 - 553589 | 127479.0 |
| hypothetical protein | EZ437_02340 | Not Available | Positive | 553952 - 554299 | 13190.7 |
| tlpa family protein disulfide reductase | EZ437_02345 | Not Available | Negative | 554551 - 556074 | 57685.1 |
| ragb/susd family nutrient uptake outer membrane protein | EZ437_02350 | Not Available | Negative | 556093 - 557523 | 52861.3 |
| susc/raga family tonb-linked outer membrane protein | EZ437_02355 | Not Available | Negative | 557606 - 561043 | 124688.0 |
| duf4974 domain-containing protein | EZ437_02360 | Not Available | Negative | 561278 - 562396 | 40935.9 |
| rna polymerase sigma-70 factor | EZ437_02365 | Not Available | Negative | 562480 - 563067 | 22641.6 |
| pirin family protein | EZ437_02370 | Not Available | Positive | 563141 - 564025 | 33252.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

