Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ437_02125 | Not Available | Positive | 511557 - 512693 | 42378.6 |
| carboxylate-amine ligase | EZ437_02130 | Not Available | Positive | 512690 - 513796 | 42383.8 |
| gmp synthase | EZ437_02135 | Not Available | Positive | 513838 - 514626 | 29745.3 |
| hypothetical protein | EZ437_02140 | Not Available | Positive | 514629 - 515816 | 45325.5 |
| feob-associated cys-rich membrane protein | EZ437_02145 | Not Available | Positive | 515868 - 516026 | 5752.13 |
| crp/fnr family transcriptional regulator | EZ437_02150 | Not Available | Positive | 516046 - 516633 | 22658.5 |
| polyisoprenoid-binding protein | EZ437_02155 | Not Available | Positive | 516837 - 517367 | 19199.3 |
| pirin family protein | EZ437_02160 | Not Available | Positive | 517419 - 518294 | 32108.0 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | EZ437_02165 | Not Available | Negative | 518617 - 519099 | 17576.3 |
| type ix secretion system outer membrane channel protein porv | EZ437_02170 | Not Available | Negative | 519184 - 520347 | 42507.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

