Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pa0069 family radical sam protein | EZ437_21345 | Not Available | Positive | 5077907 - 5078971 | 40600.0 |
| xylose isomerase | EZ437_21350 | Not Available | Negative | 5078968 - 5079903 | 34766.4 |
| fad:protein fmn transferase | EZ437_21355 | Not Available | Negative | 5079964 - 5080959 | 37046.1 |
| gfo/idh/moca family oxidoreductase | EZ437_21360 | Not Available | Negative | 5080983 - 5082308 | 49174.2 |
| formylglycine-generating enzyme family protein | EZ437_21365 | Not Available | Negative | 5082369 - 5083346 | 36930.8 |
| atp-dependent clp protease atp-binding subunit | EZ437_21370 | Not Available | Negative | 5083525 - 5086065 | 94664.5 |
| acetylxylan esterase | EZ437_21375 | Not Available | Negative | 5086431 - 5087747 | 48887.5 |
| transposase | EZ437_21380 | Not Available | Positive | 5088089 - 5088328 | 9032.57 |
| hypothetical protein | EZ437_21385 | Not Available | Positive | 5089138 - 5092995 | 141672.0 |
| rhs repeat-associated core domain-containing protein | EZ437_21390 | Not Available | Positive | 5093007 - 5096363 | 125004.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

