Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-1-semialdehyde-2,1-aminomutase | EZ437_21095 | Not Available | Positive | 5012352 - 5013725 | 49934.9 |
| two-component sensor histidine kinase | EZ437_21100 | Not Available | Positive | 5013783 - 5014649 | 32470.7 |
| response regulator transcription factor | EZ437_21105 | Not Available | Positive | 5014652 - 5015356 | 27337.4 |
| hypothetical protein | EZ437_21110 | Not Available | Positive | 5015356 - 5015871 | 19411.6 |
| uroporphyrinogen decarboxylase | EZ437_21115 | Not Available | Positive | 5015889 - 5016911 | 38059.4 |
| protoporphyrinogen oxidase hemj | EZ437_21120 | Not Available | Positive | 5016918 - 5017466 | 21369.1 |
| rna polymerase sigma factor | EZ437_21125 | Not Available | Positive | 5017563 - 5018129 | 21565.3 |
| hypothetical protein | EZ437_21130 | Not Available | Positive | 5018119 - 5018829 | 26068.9 |
| port family protein | EZ437_21135 | Not Available | Positive | 5018851 - 5019702 | 31627.4 |
| abc transporter atp-binding protein | EZ437_21140 | Not Available | Positive | 5019794 - 5020786 | 37084.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

