Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | EZ437_20945 | Not Available | Positive | 4974854 - 4975438 | 22826.5 |
| fecr family protein | EZ437_20950 | Not Available | Positive | 4975607 - 4976698 | 39778.4 |
| susc/raga family tonb-linked outer membrane protein | EZ437_20955 | Not Available | Positive | 4976871 - 4980371 | 131060.0 |
| ragb/susd family nutrient uptake outer membrane protein | EZ437_20960 | Not Available | Positive | 4980393 - 4981775 | 52101.3 |
| abc transporter atp-binding protein | EZ437_20965 | Not Available | Positive | 4981804 - 4982721 | 33631.8 |
| abc transporter | EZ437_20970 | Not Available | Positive | 4982742 - 4985054 | 87031.3 |
| dna mismatch repair protein | EZ437_20975 | Not Available | Positive | 4985080 - 4986372 | 48058.2 |
| dna mismatch repair protein | EZ437_20980 | Not Available | Positive | 4986365 - 4987708 | 49708.1 |
| ahpc/tsa family protein | EZ437_20985 | Not Available | Positive | 4987754 - 4988887 | 41685.3 |
| tlpa family protein disulfide reductase | EZ437_20990 | Not Available | Negative | 4989344 - 4989508 | 6344.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

