Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hepn domain-containing protein | EZ437_20580 | Not Available | Positive | 4891199 - 4892095 | 34250.1 |
| hypothetical protein | EZ437_20585 | Not Available | Positive | 4892043 - 4893380 | 52420.4 |
| hypothetical protein | EZ437_20590 | Not Available | Positive | 4893390 - 4893662 | 10822.2 |
| hypothetical protein | EZ437_20595 | Not Available | Positive | 4894041 - 4895069 | 39135.0 |
| orf6n domain-containing protein | EZ437_20600 | Not Available | Negative | 4895088 - 4895639 | 21603.2 |
| site-specific integrase | EZ437_20605 | Not Available | Negative | 4895701 - 4896918 | 46496.4 |
| Trna-lys | Not Available | Not Available | Positive | 4897166 - 4897241 | Not Available |
| beta-galactosidase | EZ437_20615 | Not Available | Negative | 4897447 - 4899297 | 68756.2 |
| helix-turn-helix domain-containing protein | EZ437_20620 | Not Available | Positive | 4899465 - 4902311 | 107641.0 |
| cold shock domain-containing protein | EZ437_20625 | Not Available | Negative | 4902388 - 4902579 | 6879.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

