Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylosidase | EZ437_20280 | Not Available | Positive | 4826143 - 4827405 | 48039.5 |
| merr family transcriptional regulator | EZ437_20285 | Not Available | Positive | 4827540 - 4828439 | 34446.5 |
| phytoene desaturase | EZ437_20290 | Not Available | Positive | 4828429 - 4829940 | 56996.2 |
| phytoene/squalene synthase family protein | EZ437_20295 | Not Available | Positive | 4829937 - 4830773 | 32267.6 |
| hypothetical protein | EZ437_20300 | Not Available | Positive | 4830770 - 4831276 | 19609.1 |
| isopentenyl-diphosphate delta-isomerase | EZ437_20305 | Not Available | Positive | 4831266 - 4831787 | 19980.7 |
| beta-carotene hydroxylase | EZ437_20310 | Not Available | Positive | 4831792 - 4832265 | 18616.7 |
| lycopene cyclase domain-containing protein | EZ437_20315 | Not Available | Positive | 4832262 - 4832960 | 27020.1 |
| trans-2-enoyl-coa reductase family protein | EZ437_20320 | Not Available | Positive | 4833047 - 4834237 | 43119.2 |
| hypothetical protein | EZ437_20325 | Not Available | Positive | 4834365 - 4836575 | 82749.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

