Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ437_19730 | Not Available | Positive | 4693040 - 4693966 | 34087.2 |
| rdd family protein | EZ437_19735 | Not Available | Positive | 4693967 - 4694569 | 22601.6 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | EZ437_19740 | Not Available | Positive | 4694602 - 4696533 | 71075.3 |
| response regulator | EZ437_19745 | Not Available | Positive | 4696545 - 4700681 | 156301.0 |
| duf5110 domain-containing protein | EZ437_19750 | Not Available | Positive | 4700804 - 4703662 | 108477.0 |
| tonb-dependent receptor | EZ437_19755 | Not Available | Positive | 4703702 - 4706878 | 114588.0 |
| ragb/susd family nutrient uptake outer membrane protein | EZ437_19760 | Not Available | Positive | 4706896 - 4708479 | 58039.7 |
| hypothetical protein | EZ437_19765 | Not Available | Positive | 4708506 - 4709723 | 43905.1 |
| alpha-l-arabinofuranosidase | EZ437_19770 | Not Available | Positive | 4709725 - 4711473 | 63455.6 |
| glycoside hydrolase family 95 protein | EZ437_19775 | Not Available | Positive | 4711590 - 4713872 | 84956.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

