Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | EZ437_19630 | Not Available | Negative | 4665185 - 4666498 | 48475.7 |
| circadian clock protein kaic | EZ437_19635 | Not Available | Positive | 4666622 - 4668376 | 65152.7 |
| circadian clock protein kaib | EZ437_19640 | Not Available | Positive | 4668380 - 4668670 | 10985.6 |
| circadian clock protein kaib | EZ437_19645 | Not Available | Positive | 4668671 - 4668955 | 10714.2 |
| pas domain-containing sensor histidine kinase | EZ437_19650 | Not Available | Positive | 4668965 - 4670185 | 45026.1 |
| hypothetical protein | EZ437_19655 | Not Available | Positive | 4670270 - 4671814 | 58671.1 |
| dead/deah box helicase | EZ437_19660 | Not Available | Negative | 4671860 - 4673173 | 48111.8 |
| type iia dna topoisomerase subunit b | EZ437_19665 | Not Available | Positive | 4673358 - 4675277 | 72543.2 |
| yihy/virulence factor brkb family protein | EZ437_19670 | Not Available | Negative | 4675274 - 4676275 | 36266.2 |
| hypothetical protein | EZ437_19675 | Not Available | Negative | 4676277 - 4678592 | 87434.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

