Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| csbd family protein | EZ437_19420 | Not Available | Positive | 4613758 - 4613943 | 7162.42 |
| hypothetical protein | EZ437_19425 | Not Available | Negative | 4613995 - 4616412 | 90863.4 |
| transglutaminase family protein | EZ437_19430 | Not Available | Negative | 4616479 - 4617324 | 31812.9 |
| circularly permuted type 2 atp-grasp protein | EZ437_19435 | Not Available | Positive | 4617472 - 4618920 | 54507.6 |
| alpha-e domain-containing protein | EZ437_19440 | Not Available | Positive | 4618943 - 4619872 | 35542.8 |
| transglutaminase family protein | EZ437_19445 | Not Available | Positive | 4619893 - 4620867 | 37531.6 |
| insulinase family protein | EZ437_19450 | Not Available | Negative | 4620908 - 4623841 | 110566.0 |
| stationary phase survival protein sure | EZ437_19460 | Not Available | Positive | 4624804 - 4625073 | 10338.0 |
| lipid-a-disaccharide synthase | EZ437_19465 | Not Available | Positive | 4625070 - 4626179 | 41631.8 |
| susc/raga family tonb-linked outer membrane protein | EZ437_19470 | Not Available | Positive | 4626571 - 4629606 | 111615.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

