Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjgp/yjgq family permease | EZ437_19170 | Not Available | Positive | 4549499 - 4550932 | 54127.7 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | EZ437_19175 | Not Available | Positive | 4551082 - 4552293 | 44223.4 |
| translocation/assembly module tamb | EZ437_19180 | Not Available | Negative | 4552302 - 4556729 | 164133.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | EZ437_19185 | Not Available | Positive | 4556786 - 4557787 | 36239.7 |
| hypothetical protein | EZ437_19190 | Not Available | Positive | 4557802 - 4558023 | 8442.93 |
| recombinase reca | EZ437_19195 | Not Available | Negative | 4558068 - 4559081 | 36222.8 |
| endonuclease iii | EZ437_19200 | Not Available | Negative | 4559177 - 4559860 | 25789.4 |
| hypothetical protein | EZ437_19205 | Not Available | Negative | 4559934 - 4560125 | 7165.34 |
| sigma-70 family rna polymerase sigma factor | EZ437_19210 | Not Available | Negative | 4560235 - 4560810 | 22501.3 |
| excinuclease abc subunit uvra | EZ437_19215 | Not Available | Positive | 4561078 - 4563882 | 104020.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

