Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | EZ437_19065 | Not Available | Negative | 4523114 - 4525021 | 72000.3 |
| tonb-dependent receptor | EZ437_19070 | Not Available | Negative | 4525035 - 4528208 | 116458.0 |
| class 1 fructose-bisphosphatase | EZ437_19075 | Not Available | Negative | 4528501 - 4529577 | 38778.3 |
| metallophosphoesterase | EZ437_19080 | Not Available | Negative | 4529599 - 4530090 | 18410.2 |
| methyltransferase domain-containing protein | EZ437_19085 | Not Available | Negative | 4530129 - 4530833 | 25655.0 |
| phosphoribosylformylglycinamidine synthase | EZ437_19090 | Not Available | Positive | 4530945 - 4534610 | 133867.0 |
| m56 family peptidase | EZ437_19095 | Not Available | Negative | 4534576 - 4535685 | 41788.9 |
| blai/meci/copy family transcriptional regulator | EZ437_19100 | Not Available | Negative | 4535688 - 4536071 | 14381.2 |
| hypothetical protein | EZ437_19105 | Not Available | Negative | 4536124 - 4538802 | 99813.8 |
| glpgli family protein | EZ437_19110 | Not Available | Negative | 4538799 - 4539653 | 31892.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

