Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sgcj/ecac family oxidoreductase | EZ437_18960 | Not Available | Positive | 4491117 - 4491545 | 15536.5 |
| nuclear transport factor 2 family protein | EZ437_18965 | Not Available | Positive | 4491566 - 4491901 | 12644.1 |
| hypothetical protein | EZ437_18970 | Not Available | Negative | 4492028 - 4492666 | 24467.8 |
| hypothetical protein | EZ437_18975 | Not Available | Negative | 4492689 - 4493066 | 13956.9 |
| dna mismatch repair protein | EZ437_18980 | Not Available | Negative | 4493068 - 4494429 | 51291.6 |
| dna mismatch repair protein | EZ437_18985 | Not Available | Negative | 4494431 - 4495765 | 49315.6 |
| abc transporter | EZ437_18990 | Not Available | Negative | 4495780 - 4498179 | 90780.3 |
| abc transporter atp-binding protein | EZ437_18995 | Not Available | Negative | 4498213 - 4499130 | 34398.6 |
| ragb/susd family nutrient uptake outer membrane protein | EZ437_19000 | Not Available | Negative | 4499206 - 4500732 | 56414.9 |
| susc/raga family tonb-linked outer membrane protein | EZ437_19005 | Not Available | Negative | 4500614 - 4504066 | 125664.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

