Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thua domain-containing protein | EZ437_18660 | Not Available | Negative | 4413190 - 4413957 | 27767.3 |
| gntr family transcriptional regulator | EZ437_18665 | Not Available | Negative | 4414477 - 4415454 | 37095.2 |
| duf1080 domain-containing protein | EZ437_18670 | Not Available | Positive | 4415579 - 4420069 | 167343.0 |
| hypothetical protein | EZ437_18675 | Not Available | Negative | 4420075 - 4421511 | 54561.4 |
| penicillin-binding protein | EZ437_18680 | Not Available | Positive | 4421703 - 4424162 | 93701.0 |
| tolb protein precursor | EZ437_18685 | Not Available | Positive | 4424255 - 4427386 | 117164.0 |
| giy-yig nuclease family protein | EZ437_18690 | Not Available | Negative | 4427513 - 4427860 | 13631.7 |
| helix-turn-helix domain-containing protein | EZ437_18695 | Not Available | Positive | 4427993 - 4428769 | 29527.2 |
| pyridoxal phosphate-dependent aminotransferase family protein | EZ437_18700 | Not Available | Positive | 4428775 - 4429911 | 41223.4 |
| dethiobiotin synthase | EZ437_18705 | Not Available | Positive | 4429908 - 4430519 | 22228.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

