Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | EZ437_18610 | Not Available | Negative | 4399869 - 4401428 | 58037.1 |
| susc/raga family tonb-linked outer membrane protein | EZ437_18615 | Not Available | Negative | 4401437 - 4404886 | 127260.0 |
| fecr family protein | EZ437_18620 | Not Available | Negative | 4405016 - 4406131 | 41658.3 |
| rna polymerase sigma-70 factor | EZ437_18625 | Not Available | Negative | 4406209 - 4406787 | 22940.9 |
| glycoside hydrolase family 5 protein | EZ437_18630 | Not Available | Negative | 4406936 - 4407928 | 37315.8 |
| hypothetical protein | EZ437_18635 | Not Available | Positive | 4408088 - 4408678 | 21266.2 |
| hypothetical protein | EZ437_18640 | Not Available | Negative | 4408696 - 4409697 | 38493.0 |
| energy transducer tonb | EZ437_18645 | Not Available | Negative | 4409701 - 4410153 | 16537.3 |
| mfs transporter | EZ437_18650 | Not Available | Negative | 4410386 - 4411609 | 43579.4 |
| gfo/idh/moca family oxidoreductase | EZ437_18655 | Not Available | Negative | 4412029 - 4413147 | 41518.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

