Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase family protein | EZ437_18510 | Not Available | Positive | 4381102 - 4381968 | 33275.2 |
| duf4249 domain-containing protein | EZ437_18515 | Not Available | Negative | 4381965 - 4382759 | 29275.3 |
| hypothetical protein | EZ437_18520 | Not Available | Negative | 4382763 - 4385093 | 86971.1 |
| ligase-associated dna damage response exonuclease | EZ437_18525 | Not Available | Positive | 4385361 - 4386371 | 37448.4 |
| atp-dependent dna ligase | EZ437_18530 | Not Available | Positive | 4386368 - 4387975 | 61072.9 |
| sugar phosphate isomerase/epimerase | EZ437_18535 | Not Available | Negative | 4387958 - 4388920 | 35932.2 |
| hypothetical protein | EZ437_18540 | Not Available | Positive | 4389102 - 4389455 | 13798.0 |
| hypothetical protein | EZ437_18545 | Not Available | Positive | 4389464 - 4389949 | 17705.5 |
| duf664 domain-containing protein | EZ437_18550 | Not Available | Negative | 4390163 - 4390660 | 18913.6 |
| polyketide cyclase | EZ437_18555 | Not Available | Negative | 4390716 - 4391165 | 16654.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

