Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | EZ437_18410 | Not Available | Positive | 4356926 - 4357471 | 21257.8 |
| hypothetical protein | EZ437_18415 | Not Available | Positive | 4357485 - 4358597 | 40958.8 |
| ycei family protein | EZ437_18420 | Not Available | Positive | 4358572 - 4359135 | 20690.3 |
| hypothetical protein | EZ437_18425 | Not Available | Positive | 4359141 - 4360073 | 35000.9 |
| rieske (2fe-2s) protein | EZ437_18430 | Not Available | Positive | 4360091 - 4360552 | 15548.4 |
| alanine--trna ligase | EZ437_18435 | Not Available | Negative | 4360570 - 4363269 | 101981.0 |
| merr family transcriptional regulator | EZ437_18440 | Not Available | Positive | 4363470 - 4363805 | 13086.9 |
| helix-hairpin-helix domain-containing protein | EZ437_18445 | Not Available | Positive | 4363914 - 4365947 | 76923.1 |
| comec family competence protein | EZ437_18450 | Not Available | Positive | 4365947 - 4367536 | 60768.6 |
| mfs transporter | EZ437_18455 | Not Available | Negative | 4367605 - 4368834 | 42711.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

