Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | EZ437_18100 | Not Available | Negative | 4271451 - 4272071 | 23408.0 |
| endopeptidase la | EZ437_18105 | Not Available | Positive | 4272388 - 4274859 | 92209.9 |
| hypothetical protein | EZ437_18110 | Not Available | Positive | 4274951 - 4275466 | 18339.7 |
| lipid a deacylase lpxr family protein | EZ437_18115 | Not Available | Positive | 4275533 - 4276486 | 36011.3 |
| aminoacyl-trna hydrolase | EZ437_18120 | Not Available | Negative | 4276483 - 4276893 | 15454.8 |
| (d)cmp kinase | EZ437_18125 | Not Available | Positive | 4277386 - 4278066 | 25594.5 |
| efflux rnd transporter periplasmic adaptor subunit | EZ437_18130 | Not Available | Positive | 4278228 - 4279391 | 41678.0 |
| efflux rnd transporter permease subunit | EZ437_18135 | Not Available | Positive | 4279398 - 4282571 | 114740.0 |
| efflux transporter outer membrane subunit | EZ437_18140 | Not Available | Positive | 4282584 - 4283993 | 51331.8 |
| tonb-dependent siderophore receptor | EZ437_18145 | Not Available | Positive | 4284092 - 4286467 | 88097.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

