Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase ib | EZ437_17950 | Not Available | Negative | 4235896 - 4236981 | 41212.0 |
| methionyl-trna formyltransferase | EZ437_17955 | Not Available | Positive | 4237059 - 4237967 | 33201.3 |
| 4-amino-4-deoxychorismate lyase | EZ437_17960 | Not Available | Negative | 4237962 - 4238801 | 31410.1 |
| rlua family pseudouridine synthase | EZ437_17965 | Not Available | Negative | 4238813 - 4239844 | 39061.6 |
| pyridoxal-phosphate dependent enzyme | EZ437_17970 | Not Available | Positive | 4240146 - 4241042 | 32756.0 |
| glycoside hydrolase family 18 protein | EZ437_17975 | Not Available | Negative | 4241032 - 4242027 | 36948.7 |
| glycoside hydrolase | EZ437_17980 | Not Available | Negative | 4242035 - 4243108 | 40727.1 |
| duf5009 domain-containing protein | EZ437_17985 | Not Available | Negative | 4243137 - 4244336 | 44013.5 |
| thua domain-containing protein | EZ437_17990 | Not Available | Negative | 4244333 - 4245118 | 29624.8 |
| glycosyl transferase | EZ437_17995 | Not Available | Negative | 4245134 - 4246912 | 65577.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

