Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valine--trna ligase | EZ437_17750 | Not Available | Positive | 4167565 - 4170261 | 103006.0 |
| s9 family peptidase | EZ437_17755 | Not Available | Negative | 4170293 - 4172446 | 81154.8 |
| dmt family transporter | EZ437_17760 | Not Available | Positive | 4172535 - 4173407 | 32253.5 |
| hypothetical protein | EZ437_17765 | Not Available | Negative | 4173683 - 4174018 | 12984.9 |
| duf86 domain-containing protein | EZ437_17770 | Not Available | Negative | 4174044 - 4174394 | 13348.9 |
| nucleotidyltransferase | EZ437_17775 | Not Available | Negative | 4174384 - 4174677 | 11386.7 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | EZ437_17780 | Not Available | Positive | 4174780 - 4175448 | 25147.1 |
| histidine ammonia-lyase | EZ437_17785 | Not Available | Positive | 4175528 - 4177099 | 56637.9 |
| urocanate hydratase | EZ437_17790 | Not Available | Positive | 4177110 - 4179110 | 74047.1 |
| aldo/keto reductase | EZ437_17795 | Not Available | Positive | 4179194 - 4180147 | 36061.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

