Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyttr family transcriptional regulator | EZ437_01675 | Not Available | Negative | 387716 - 388597 | 34450.1 |
| arac family transcriptional regulator | EZ437_01680 | Not Available | Positive | 388921 - 389919 | 38295.3 |
| hypothetical protein | EZ437_01685 | Not Available | Positive | 390175 - 390633 | 17401.0 |
| hypothetical protein | EZ437_01690 | Not Available | Positive | 390644 - 391021 | 13185.8 |
| redoxin domain-containing protein | EZ437_01695 | Not Available | Negative | 391085 - 392380 | 48985.5 |
| ragb/susd family nutrient uptake outer membrane protein | EZ437_01700 | Not Available | Negative | 392381 - 393760 | 51515.2 |
| susc/raga family tonb-linked outer membrane protein | EZ437_01705 | Not Available | Negative | 393776 - 397297 | 131556.0 |
| fecr family protein | EZ437_01710 | Not Available | Negative | 397418 - 398557 | 42359.3 |
| rna polymerase sigma-70 factor | EZ437_01715 | Not Available | Negative | 398646 - 399218 | 22553.0 |
| xre family transcriptional regulator | EZ437_01720 | Not Available | Positive | 399639 - 400082 | 16850.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

