Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf808 domain-containing protein | EZ437_17390 | Not Available | Negative | 4082872 - 4083738 | 30877.0 |
| hypothetical protein | EZ437_17395 | Not Available | Negative | 4083798 - 4084367 | 20706.9 |
| matrixin family metalloprotease | EZ437_17400 | Not Available | Positive | 4084499 - 4086028 | 57447.2 |
| duf4419 domain-containing protein | EZ437_17405 | Not Available | Negative | 4086060 - 4087259 | 45682.0 |
| rhodanese-like domain-containing protein | EZ437_17410 | Not Available | Positive | 4087388 - 4087858 | 16705.7 |
| l-rhamnose/proton symporter rhat | EZ437_17415 | Not Available | Negative | 4087918 - 4088997 | 39155.3 |
| gntr family transcriptional regulator | EZ437_17420 | Not Available | Negative | 4089089 - 4090120 | 39398.8 |
| alpha-rhamnosidase | EZ437_17425 | Not Available | Negative | 4090120 - 4092759 | 98307.4 |
| alpha-l-rhamnosidase | EZ437_17430 | Not Available | Negative | 4092834 - 4095563 | 101565.0 |
| response regulator | EZ437_17435 | Not Available | Positive | 4095776 - 4096147 | 13842.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

