Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ghkl domain-containing protein | EZ437_17290 | Not Available | Negative | 4059704 - 4060816 | 43094.2 |
| tonb-dependent receptor | EZ437_17295 | Not Available | Positive | 4060847 - 4063309 | 91738.5 |
| hypothetical protein | EZ437_17300 | Not Available | Negative | 4063389 - 4063818 | 16052.9 |
| hypothetical protein | EZ437_17305 | Not Available | Positive | 4063912 - 4064553 | 23932.3 |
| duf805 domain-containing protein | EZ437_17310 | Not Available | Positive | 4064807 - 4065217 | 15399.4 |
| erythromycin esterase family protein | EZ437_17315 | Not Available | Negative | 4065287 - 4066516 | 47324.3 |
| ribose 5-phosphate isomerase a | EZ437_17320 | Not Available | Positive | 4066601 - 4067296 | 25182.6 |
| duf4180 domain-containing protein | EZ437_17325 | Not Available | Negative | 4067325 - 4067678 | 13216.8 |
| metallophosphoesterase | EZ437_17330 | Not Available | Negative | 4067798 - 4069387 | 59336.0 |
| ragb/susd family nutrient uptake outer membrane protein | EZ437_17335 | Not Available | Negative | 4069419 - 4071131 | 63359.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

