Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase-like regulatory domain-containing protein | EZ437_15730 | Not Available | Positive | 3659630 - 3660697 | 39736.9 |
| c-type cytochrome | EZ437_15735 | Not Available | Positive | 3660783 - 3664583 | 141562.0 |
| hypothetical protein | EZ437_15740 | Not Available | Negative | 3664662 - 3665783 | 42218.4 |
| duf4959 domain-containing protein | EZ437_15745 | Not Available | Negative | 3665817 - 3667055 | 46446.2 |
| ragb/susd family nutrient uptake outer membrane protein | EZ437_15750 | Not Available | Negative | 3667049 - 3668947 | 72116.3 |
| susc/raga family tonb-linked outer membrane protein | EZ437_15755 | Not Available | Negative | 3668960 - 3672307 | 124253.0 |
| fecr family protein | EZ437_15760 | Not Available | Negative | 3672546 - 3673694 | 43104.0 |
| rna polymerase sigma-70 factor | EZ437_15765 | Not Available | Positive | 3673818 - 3674369 | 21408.3 |
| gamma-glutamyltransferase family protein | EZ437_15770 | Not Available | Negative | 3674378 - 3676258 | 69141.5 |
| serine hydrolase | EZ437_15775 | Not Available | Positive | 3676435 - 3678249 | 67471.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

