Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease vii small subunit | EZ437_15630 | Not Available | Negative | 3630727 - 3630924 | 7435.86 |
| exodeoxyribonuclease vii large subunit | EZ437_15635 | Not Available | Negative | 3630902 - 3632293 | 52384.8 |
| ld-carboxypeptidase | EZ437_15640 | Not Available | Negative | 3632268 - 3633293 | 37940.6 |
| hypothetical protein | EZ437_15645 | Not Available | Positive | 3633486 - 3634517 | 38195.4 |
| duf1080 domain-containing protein | EZ437_15650 | Not Available | Positive | 3634545 - 3635909 | 50586.0 |
| gfo/idh/moca family oxidoreductase | EZ437_15655 | Not Available | Positive | 3635922 - 3637280 | 50984.4 |
| t9ss type b sorting domain-containing protein | EZ437_15660 | Not Available | Negative | 3637405 - 3640527 | 106719.0 |
| sodium transporter | EZ437_15665 | Not Available | Negative | 3640753 - 3642438 | 61389.6 |
| c-type cytochrome | EZ437_15670 | Not Available | Negative | 3642556 - 3644517 | 72388.0 |
| duf1080 domain-containing protein | EZ437_15675 | Not Available | Negative | 3644529 - 3645956 | 51454.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

