Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5005 domain-containing protein | EZ437_15180 | Not Available | Positive | 3522327 - 3523502 | 43460.4 |
| duf805 domain-containing protein | EZ437_15185 | Not Available | Positive | 3523752 - 3524180 | 16236.9 |
| sigma-70 family rna polymerase sigma factor | EZ437_15190 | Not Available | Positive | 3524327 - 3524605 | 10708.2 |
| hypothetical protein | EZ437_15195 | Not Available | Positive | 3524679 - 3525317 | 23861.8 |
| smp-30/gluconolactonase/lre family protein | EZ437_15200 | Not Available | Positive | 3525340 - 3526356 | 36626.7 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | EZ437_15205 | Not Available | Positive | 3526377 - 3527030 | 22929.8 |
| galactonate dehydratase | EZ437_15210 | Not Available | Positive | 3527056 - 3528204 | 42795.4 |
| mfs transporter | EZ437_15215 | Not Available | Positive | 3528216 - 3529520 | 48446.9 |
| 2-dehydro-3-deoxygalactonokinase | EZ437_15220 | Not Available | Positive | 3529517 - 3530482 | 35353.4 |
| arsr family transcriptional regulator | EZ437_15225 | Not Available | Positive | 3530700 - 3531029 | 11782.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

