Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose/gdp-mannose dehydrogenase family protein | EZ437_00085 | Not Available | Negative | 15025 - 16335 | 47929.9 |
| 3-deoxy-d-manno-octulosonic acid transferase | EZ437_00090 | Not Available | Positive | 16399 - 17613 | 46297.1 |
| ferrochelatase | EZ437_00095 | Not Available | Negative | 17610 - 18623 | 38297.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | EZ437_00100 | Not Available | Negative | 18688 - 19536 | 32109.1 |
| hypothetical protein | EZ437_00105 | Not Available | Negative | 19631 - 20515 | 33628.9 |
| glycerol acyltransferase | EZ437_00110 | Not Available | Negative | 20512 - 21132 | 24353.3 |
| phosphoribosyltransferase | EZ437_00115 | Not Available | Negative | 21172 - 21681 | 19433.8 |
| duf2807 domain-containing protein | EZ437_00120 | Not Available | Positive | 21841 - 22554 | 25169.8 |
| hypothetical protein | EZ437_00125 | Not Available | Negative | 22623 - 23027 | 15464.6 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | EZ437_00130 | Not Available | Negative | 23040 - 24503 | 55057.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

