Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase/3'-5' exonuclease polx | EZ437_14725 | Not Available | Negative | 3411322 - 3413007 | 63091.1 |
| signal peptide peptidase sppa | EZ437_14730 | Not Available | Negative | 3413043 - 3414815 | 64688.0 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | EZ437_14735 | Not Available | Positive | 3414874 - 3415368 | 18190.3 |
| hpt domain-containing protein | EZ437_14740 | Not Available | Positive | 3415427 - 3415801 | 14144.7 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | EZ437_14745 | Not Available | Negative | 3415808 - 3416494 | 25594.9 |
| transcription termination factor rho | EZ437_14750 | Not Available | Negative | 3416498 - 3418159 | 61562.2 |
| orotidine-5'-phosphate decarboxylase | EZ437_14755 | Not Available | Positive | 3418431 - 3419261 | 30689.9 |
| permease | EZ437_14760 | Not Available | Positive | 3419258 - 3420154 | 33132.8 |
| duf2851 family protein | EZ437_14765 | Not Available | Positive | 3420198 - 3421478 | 49283.4 |
| pspc domain-containing protein | EZ437_14770 | Not Available | Positive | 3421480 - 3421701 | 8749.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

