Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 3402937 - 3403021 | Not Available |
| trigger factor | EZ437_14680 | Not Available | Positive | 3403160 - 3404506 | 51176.7 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | EZ437_14685 | Not Available | Positive | 3404684 - 3405379 | 25681.9 |
| atp-dependent clp protease atp-binding subunit clpx | EZ437_14690 | Not Available | Positive | 3405382 - 3406626 | 46059.9 |
| amp nucleosidase | EZ437_14695 | Not Available | Positive | 3406865 - 3407728 | 31942.9 |
| histidine phosphatase family protein | EZ437_14700 | Not Available | Negative | 3407725 - 3408225 | 18566.9 |
| lipopolysaccharide heptosyltransferase family protein | EZ437_14705 | Not Available | Negative | 3408251 - 3409189 | 35541.3 |
| d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase | EZ437_14710 | Not Available | Negative | 3409245 - 3409742 | 18203.9 |
| sis domain-containing protein | EZ437_14715 | Not Available | Negative | 3409745 - 3410299 | 19591.6 |
| d-glycero-beta-d-manno-heptose-7-phosphate kinase | EZ437_14720 | Not Available | Negative | 3410306 - 3411286 | 35255.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

