Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftsx-like permease family protein | EZ437_14625 | Not Available | Positive | 3387123 - 3389534 | 90742.3 |
| cobalamin-binding protein | EZ437_14630 | Not Available | Positive | 3389549 - 3390346 | 30360.9 |
| m1 family peptidase | EZ437_14635 | Not Available | Negative | 3390374 - 3392854 | 92630.7 |
| s9 family peptidase | EZ437_14640 | Not Available | Positive | 3393112 - 3395154 | 75595.3 |
| class a beta-lactamase-related serine hydrolase | EZ437_14645 | Not Available | Negative | 3395464 - 3396753 | 46866.7 |
| carboxymuconolactone decarboxylase | EZ437_14650 | Not Available | Positive | 3396981 - 3397541 | 20038.0 |
| tonb-dependent receptor | EZ437_14655 | Not Available | Positive | 3397585 - 3400362 | 100698.0 |
| mfs transporter | EZ437_14660 | Not Available | Positive | 3400409 - 3401650 | 44682.8 |
| carboxymuconolactone decarboxylase | EZ437_14665 | Not Available | Positive | 3401661 - 3402206 | 19936.0 |
| carboxymuconolactone decarboxylase family protein | EZ437_14670 | Not Available | Positive | 3402208 - 3402753 | 19651.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

