Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna guanosine(34) transglycosylase tgt | EZ437_14375 | Not Available | Negative | 3319119 - 3320249 | 42440.3 |
| glycosyltransferase | EZ437_14380 | Not Available | Positive | 3320328 - 3321500 | 45134.8 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | EZ437_14385 | Not Available | Positive | 3321491 - 3322123 | 23930.8 |
| m56 family metallopeptidase | EZ437_14390 | Not Available | Negative | 3322130 - 3323764 | 61446.9 |
| blai/meci/copy family transcriptional regulator | EZ437_14395 | Not Available | Negative | 3323761 - 3324132 | 14522.7 |
| dna-protecting protein dpra | EZ437_14400 | Not Available | Positive | 3324277 - 3325365 | 39936.3 |
| pyridoxal-phosphate dependent enzyme | EZ437_14405 | Not Available | Positive | 3325517 - 3326878 | 50200.3 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | EZ437_14410 | Not Available | Negative | 3326881 - 3328206 | 48008.0 |
| duf4290 domain-containing protein | EZ437_14415 | Not Available | Negative | 3328237 - 3328905 | 25941.9 |
| atp-dependent dna helicase | EZ437_14420 | Not Available | Negative | 3328986 - 3331307 | 88052.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

