Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4974 domain-containing protein | EZ437_13915 | Not Available | Positive | 3197759 - 3198904 | 42417.9 |
| susc/raga family tonb-linked outer membrane protein | EZ437_13920 | Not Available | Positive | 3199151 - 3202531 | 123783.0 |
| ragb/susd family nutrient uptake outer membrane protein | EZ437_13925 | Not Available | Positive | 3202543 - 3204018 | 53324.4 |
| ahpc/tsa family protein | EZ437_13930 | Not Available | Positive | 3204113 - 3205291 | 43032.6 |
| magnesium transporter | EZ437_13935 | Not Available | Positive | 3205478 - 3206848 | 51085.9 |
| hamp domain-containing histidine kinase | EZ437_13940 | Not Available | Negative | 3206866 - 3208563 | 63629.1 |
| redox-regulated atpase ychf | EZ437_13945 | Not Available | Negative | 3208563 - 3209657 | 40001.9 |
| hypothetical protein | EZ437_13950 | Not Available | Positive | 3209754 - 3210224 | 16935.3 |
| abc transporter permease | EZ437_13955 | Not Available | Negative | 3210310 - 3212682 | 87934.0 |
| hypothetical protein | EZ437_13960 | Not Available | Negative | 3212839 - 3214164 | 49830.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

