Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrilase family protein | EZ437_13610 | Not Available | Negative | 3126429 - 3127208 | 30370.4 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EZ437_13615 | Not Available | Negative | 3127253 - 3128398 | 42896.0 |
| vut family protein | EZ437_13620 | Not Available | Positive | 3128466 - 3129236 | 28613.7 |
| l-glyceraldehyde 3-phosphate reductase | EZ437_13625 | Not Available | Positive | 3129435 - 3130430 | 37251.5 |
| duf480 domain-containing protein | EZ437_13630 | Not Available | Positive | 3130434 - 3131087 | 24465.6 |
| hypothetical protein | EZ437_13635 | Not Available | Negative | 3131115 - 3131504 | 15416.1 |
| low affinity iron permease family protein | EZ437_13640 | Not Available | Positive | 3131645 - 3132100 | 17239.6 |
| pas domain s-box protein | EZ437_13645 | Not Available | Positive | 3132167 - 3133702 | 58639.4 |
| pas domain s-box protein | EZ437_13650 | Not Available | Positive | 3133799 - 3135619 | 69290.4 |
| transcription elongation factor greab | EZ437_13655 | Not Available | Positive | 3135933 - 3136316 | 14343.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

