Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lmo0937 family membrane protein | EZ437_12960 | Not Available | Positive | 2981526 - 2981687 | 5703.53 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | EZ437_12965 | Not Available | Negative | 2981726 - 2982403 | 25170.4 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | EZ437_12970 | Not Available | Negative | 2982404 - 2983453 | 40022.2 |
| abc transporter permease | EZ437_12975 | Not Available | Negative | 2983554 - 2984795 | 45570.6 |
| pyridoxal phosphate-dependent aminotransferase | EZ437_12980 | Not Available | Negative | 2984909 - 2986048 | 41573.4 |
| cation transporter | EZ437_12985 | Not Available | Positive | 2986216 - 2987214 | 37101.4 |
| nudix hydrolase | EZ437_12990 | Not Available | Positive | 2987211 - 2987660 | 17096.3 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | EZ437_12995 | Not Available | Positive | 2987647 - 2988915 | 46966.8 |
| hypothetical protein | EZ437_13000 | Not Available | Positive | 2988920 - 2989528 | 23433.2 |
| ligase-associated dna damage response endonuclease pdem | EZ437_13005 | Not Available | Negative | 2989525 - 2990160 | 24375.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

