Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system protein gcvh | EZ437_01175 | Not Available | Negative | 267718 - 268098 | 13863.2 |
| cell surface protein spra | EZ437_01180 | Not Available | Negative | 268189 - 275334 | 268374.0 |
| holliday junction branch migration protein ruva | EZ437_01185 | Not Available | Negative | 275381 - 275965 | 21293.1 |
| nadp-dependent malic enzyme | EZ437_01190 | Not Available | Negative | 275970 - 278285 | 84858.2 |
| lysm peptidoglycan-binding domain-containing protein | EZ437_01195 | Not Available | Negative | 278422 - 279633 | 45861.4 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | EZ437_01200 | Not Available | Negative | 279645 - 281081 | 51975.0 |
| twin-arginine translocase tata/tate family subunit | EZ437_01205 | Not Available | Negative | 281126 - 281338 | 7482.38 |
| twin-arginine translocase tata/tate family subunit | EZ437_01210 | Not Available | Negative | 281349 - 281741 | 14505.2 |
| peptidase m23 | EZ437_01215 | Not Available | Negative | 281824 - 283077 | 47416.1 |
| duf4292 domain-containing protein | EZ437_01220 | Not Available | Negative | 283100 - 283894 | 29393.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

