Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3857 domain-containing protein | EZ437_11950 | Not Available | Negative | 2749654 - 2751564 | 72665.5 |
| duf3857 domain-containing protein | EZ437_11955 | Not Available | Negative | 2751569 - 2753539 | 74679.4 |
| 3'-5' exonuclease | EZ437_11960 | Not Available | Positive | 2753682 - 2754692 | 38792.3 |
| trna epoxyqueuosine(34) reductase queg | EZ437_11965 | Not Available | Negative | 2754771 - 2755712 | 35758.8 |
| hypothetical protein | EZ437_11970 | Not Available | Positive | 2755784 - 2755993 | 7913.48 |
| holliday junction branch migration dna helicase ruvb | EZ437_11975 | Not Available | Negative | 2756069 - 2757091 | 37559.1 |
| 3-hydroxybutyryl-coa dehydrogenase | EZ437_11980 | Not Available | Negative | 2757101 - 2757988 | 31527.5 |
| pyridoxamine 5'-phosphate oxidase | EZ437_11985 | Not Available | Negative | 2758061 - 2758711 | 24948.3 |
| yqge/algh family protein | EZ437_11990 | Not Available | Positive | 2758760 - 2759323 | 21369.2 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | EZ437_11995 | Not Available | Negative | 2759320 - 2759856 | 18866.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

