Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phoh family protein | EZ437_11850 | Not Available | Positive | 2726250 - 2727218 | 35846.7 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | EZ437_11855 | Not Available | Positive | 2727231 - 2728172 | 35213.2 |
| anti-sigma factor antagonist | EZ437_11860 | Not Available | Positive | 2728243 - 2728629 | 14284.0 |
| ribonuclease z | EZ437_11865 | Not Available | Positive | 2728629 - 2729540 | 34612.6 |
| mce family protein | EZ437_11870 | Not Available | Negative | 2729541 - 2730494 | 34122.1 |
| n-acetylmuramoyl-l-alanine amidase | EZ437_11875 | Not Available | Negative | 2730509 - 2731354 | 31676.1 |
| n-acetylmuramoyl-l-alanine amidase | EZ437_11880 | Not Available | Negative | 2731370 - 2732272 | 33679.7 |
| lps-assembly protein lptd | EZ437_11885 | Not Available | Positive | 2732371 - 2734950 | 96351.6 |
| competence/damage-inducible protein a | EZ437_11890 | Not Available | Positive | 2734965 - 2736206 | 45058.8 |
| 2-oxo acid dehydrogenase subunit e2 | EZ437_11895 | Not Available | Positive | 2736263 - 2737573 | 47771.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

