Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | EZ437_11800 | Not Available | Negative | 2715075 - 2715494 | 16037.3 |
| 30s ribosomal protein s15 | EZ437_11805 | Not Available | Positive | 2715621 - 2715923 | 11537.1 |
| polyribonucleotide nucleotidyltransferase | EZ437_11810 | Not Available | Positive | 2716039 - 2718183 | 77654.5 |
| ribulose-phosphate 3-epimerase | EZ437_11815 | Not Available | Positive | 2718325 - 2718996 | 23783.0 |
| tonb-dependent receptor | EZ437_11820 | Not Available | Positive | 2719006 - 2721408 | 90983.1 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | EZ437_11825 | Not Available | Positive | 2721456 - 2722520 | 39081.2 |
| 3-phosphoglycerate dehydrogenase | EZ437_11830 | Not Available | Positive | 2722535 - 2723482 | 33570.6 |
| duf1015 domain-containing protein | EZ437_11835 | Not Available | Positive | 2723559 - 2724806 | 46692.1 |
| hypothetical protein | EZ437_11840 | Not Available | Negative | 2724803 - 2725327 | 20272.4 |
| hypothetical protein | EZ437_11845 | Not Available | Negative | 2725369 - 2726148 | 29357.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

