Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1080 domain-containing protein | EZ437_11535 | Not Available | Positive | 2661771 - 2662439 | 25471.4 |
| hypothetical protein | EZ437_11540 | Not Available | Negative | 2662458 - 2663651 | 42736.8 |
| ragb/susd family nutrient uptake outer membrane protein | EZ437_11545 | Not Available | Negative | 2663951 - 2665624 | 62113.8 |
| tonb-dependent receptor | EZ437_11550 | Not Available | Negative | 2665645 - 2668656 | 108727.0 |
| dna-binding protein | EZ437_11555 | Not Available | Positive | 2669134 - 2669406 | 10179.2 |
| crp/fnr family transcriptional regulator | EZ437_11560 | Not Available | Positive | 2669774 - 2670340 | 21827.3 |
| rida family protein | EZ437_11565 | Not Available | Positive | 2670450 - 2670842 | 14517.2 |
| hypothetical protein | EZ437_11575 | Not Available | Positive | 2671611 - 2671826 | 7941.48 |
| transposase | EZ437_11580 | Not Available | Positive | 2672132 - 2672404 | 10080.4 |
| rna polymerase sigma-70 factor | EZ437_11585 | Not Available | Positive | 2672596 - 2673174 | 23009.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

