Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EZ437_11430 | Not Available | Positive | 2631248 - 2634514 | 120794.0 |
| ragb/susd family nutrient uptake outer membrane protein | EZ437_11435 | Not Available | Positive | 2634546 - 2636336 | 67121.4 |
| metallophosphoesterase | EZ437_11440 | Not Available | Positive | 2636372 - 2637286 | 34227.5 |
| alkaline phosphatase family protein | EZ437_11445 | Not Available | Positive | 2637294 - 2638535 | 47091.8 |
| hypothetical protein | EZ437_11450 | Not Available | Positive | 2638667 - 2639329 | 24929.5 |
| murein l,d-transpeptidase | EZ437_11455 | Not Available | Negative | 2639350 - 2640984 | 62559.2 |
| arac family transcriptional regulator | EZ437_11465 | Not Available | Positive | 2641509 - 2642330 | 31361.0 |
| voc family protein | EZ437_11470 | Not Available | Positive | 2642398 - 2642892 | 17445.1 |
| hypothetical protein | EZ437_11475 | Not Available | Negative | 2642921 - 2645725 | 104741.0 |
| n-acetylgalactosamine-6-sulfatase | EZ437_11480 | Not Available | Positive | 2646052 - 2647416 | 50973.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

